PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_34817-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 306aa    MW: 34030 Da    PI: 7.2225
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_34817-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH55.79e-1895141455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       hn+ Er+RRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIUR3_34817-P1  95 VHNQSERKRRDRINEKMKALQELVPHC-----NKSDKASILDEAIEYLKSLQ 141
                      6*************************8.....6******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.02E-1787145No hitNo description
SuperFamilySSF474598.77E-2089148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088818.29291140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-2095149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.6E-1595141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-1897146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MEVIHSLEAQ FERYFTEVPI LKGRPSRQGK ILPNGCKASA LLWNKCKHQG LEPWWTGDTT  60
VPLIIQAQDA DDCEAVNEPR PQRPAAKRRT RAAEVHNQSE RKRRDRINEK MKALQELVPH  120
CNKSDKASIL DEAIEYLKSL QLQVQVQNSK SHPEFLISPQ SSTIMWMATG MAPMMYPGAH  180
QLMPPMAMGL NSACMPAAQS LSQLQRVAPF MNHHLPNQMP RVQSPAMDSL NVGNNGVCDL  240
EMTLLEPASA QGYNLGNSVR LSTDVTPLLQ SPPVETGTSL CIYTSRFGCH AQDDVSVNYE  300
APLMTS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
186103KRRTRAAEVHNQSERKRR
299104ERKRRD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010228425.12e-80PREDICTED: transcription factor PIF4-like isoform X1
RefseqXP_010228426.12e-80PREDICTED: transcription factor PIF4-like isoform X2
TrEMBLM7Z3840.0M7Z384_TRIUA; Transcription factor PIF5
STRINGMLOC_77331.39e-86(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31743482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.16e-29phytochrome interacting factor 3-like 5